| 1. | Final Fantasy Tactics Advance | 66,045 | 7.53% | 1 | 9:29 |
| 2. | Danganronpa: Trigger Happy Havoc | 37,567 | 4.29% | 1 | 11:48 |
| 3. | Xenogears | 36,724 | 4.19% | 1 | 10:22 |
| 4. | Earthbound | 31,739 | 3.62% | 16 | 5:29:08 |
| 5. | Mother 3 | 31,109 | 3.55% | 1 | 13:11 |
| 6. | Luminous Arc | 25,941 | 2.96% | 1 | 15:31 |
| 7. | Deep Labyrinth | 25,662 | 2.93% | 1 | 16:01 |
| 8. | Wild Arms | 20,826 | 2.38% | 1 | 14:32 |
| 9. | Zero Escape: Virtue's Last Reward | 17,273 | 1.97% | 2 | 20:10 |
| 10. | Professor Layton vs. Phoenix Wright: Ace Attorney | 15,528 | 1.77% | 2 | 20:24 |
| 11. | Wild Arms 2 | 14,953 | 1.71% | 1 | 15:34 |
| 12. | LostMagic | 14,038 | 1.60% | 1 | 17:35 |
| 13. | Suikoden II | 13,910 | 1.59% | 1 | 15:58 |
| 14. | Mega Man Battle Network | 13,886 | 1.58% | 2 | 29:46 |
| 15. | Persona 4 | 13,490 | 1.54% | 2 | 17:11 |
| 16. | Summon Night: Swordcraft Story | 12,641 | 1.44% | 1 | 14:08 |
| 17. | Mega Man Star Force 2 | 12,309 | 1.40% | 1 | 13:45 |
| 18. | Mega Man X: Command Mission | 10,357 | 1.18% | 1 | 19:55 |
| 19. | Chrono Trigger | 9,679 | 1.10% | 3 | 41:47 |
| 20. | Inazuma Eleven 2 | 9,629 | 1.10% | 1 | 16:58 |
| 21. | Mega Man Star Force | 9,309 | 1.06% | 1 | 17:38 |
| 22. | Inazuma Eleven | 9,142 | 1.04% | 1 | 19:27 |
| 23. | Another Code: Two Memories | 8,300 | 0.95% | 1 | 9:24 |
| 24. | Apollo Justice: Ace Attorney | 8,081 | 0.92% | 1 | 9:16 |
| 25. | Suikoden | 7,816 | 0.89% | 1 | 15:01 |
| 26. | Zero Time Dilemma | 7,784 | 0.89% | 5 | 1:14:14 |
| 27. | Grandia II | 7,521 | 0.86% | 1 | 17:16 |
| 28. | Paladin's Quest | 7,333 | 0.84% | 1 | 5:55 |
| 29. | One Piece: Grand Battle! | 7,151 | 0.82% | 1 | 5:30 |
| 30. | Chrono Cross | 6,806 | 0.78% | 1 | 11:31 |
| 31. | Shin Megami Tensei IV | 6,730 | 0.77% | 1 | 11:02 |
| 32. | Terranigma | 6,721 | 0.77% | 1 | 12:23 |
| 33. | Dragon Quest | 6,656 | 0.76% | 1 | 4:10 |
| 34. | Riviera: The Promised Land | 6,408 | 0.73% | 2 | 26:10 |
| 35. | Grandia | 6,375 | 0.73% | 1 | 15:00 |
| 36. | Luminous Arc 2 | 6,328 | 0.72% | 1 | 13:44 |
| 37. | Illusion of Gaia | 6,033 | 0.69% | 1 | 12:00 |
| 38. | Umineko: When They Cry | 5,709 | 0.65% | 1 | 10:01 |
| 39. | The Legend of Heroes: Trails in the Sky | 5,601 | 0.64% | 1 | 20:01 |
| 40. | Final Fantasy IX | 5,560 | 0.63% | 1 | 9:03 |
| 41. | Summon Night: Swordcraft Story 2 | 5,409 | 0.62% | 1 | 9:56 |
| 42. | Lunar: The Silver Star | 5,081 | 0.58% | 1 | 15:00 |
| 43. | Mega Man Legends | 5,020 | 0.57% | 1 | 22:01 |
| 44. | Ever 17: The Out of Infinity | 4,963 | 0.57% | 1 | 20:01 |
| 45. | Kingdom Hearts | 4,952 | 0.56% | 1 | 8:03 |
| 46. | Valkyrie Profile: Lenneth | 4,537 | 0.52% | 1 | 20:00 |
| 47. | Lunar 2: Eternal Blue Complete | 4,474 | 0.51% | 1 | 18:01 |
| 48. | Shovel Knight | 4,406 | 0.50% | 1 | 5:11 |
| 49. | Live A Live | 4,377 | 0.50% | 2 | 30:11 |
| 50. | Remember 11: The Age of Infinity | 4,370 | 0.50% | 1 | 23:02 |
| 51. | Secret of Evermore | 4,248 | 0.48% | 1 | 6:48 |
| 52. | The Wizard of Oz: Beyond the Yellow Brick Road | 4,193 | 0.48% | 1 | 14:01 |
| 53. | Final Fantasy | 3,567 | 0.41% | 1 | 0:36 |
| 54. | Disney's Pinocchio | 3,542 | 0.40% | 1 | 10:01 |
| 55. | Robotrek | 3,514 | 0.40% | 1 | 16:35 |
| 56. | Nine Hours, Nine Persons, Nine Doors | 3,496 | 0.40% | 1 | 21:12 |
| 57. | Persona 3 | 3,432 | 0.39% | 2 | 19:24 |
| 58. | Skies of Arcadia | 3,403 | 0.39% | 1 | 15:36 |
| 59. | Soul Blazer | 3,402 | 0.39% | 1 | 11:23 |
| 60. | Mega Man Legends 2 | 3,388 | 0.39% | 1 | 0:08 |
| 61. | The Legend of Zelda: Ocarina of Time | 3,263 | 0.37% | 2 | 23:35 |
| 62. | Final Fantasy VIII | 3,129 | 0.36% | 2 | 13:32 |
| 63. | The Twisted Tales of Spike McFang | 3,056 | 0.35% | 1 | 10:43 |
| 64. | Astro Boy: Omega Factor | 2,969 | 0.34% | 1 | 6:36 |
| 65. | Dragon Ball Z: The Legacy of Goku | 2,915 | 0.33% | 1 | 6:12 |
| 66. | Kanye Quest 3030 | 2,910 | 0.33% | 6 | 2:05:57 |
| 67. | One Piece: Pirates' Carnival | 2,909 | 0.33% | 1 | 6:09 |
| 68. | Survival Kids | 2,896 | 0.33% | 1 | 10:51 |
| 69. | Never 7: The End of Infinity | 2,730 | 0.31% | 1 | 14:55 |
| 70. | God Medicine | 2,662 | 0.30% | 1 | 8:37 |
| 71. | Final Fantasy VII | 2,632 | 0.30% | 2 | 11:19 |
| 72. | Mega Man & Bass | 2,418 | 0.28% | 1 | 5:42 |
| 73. | Tales of Symphonia | 2,324 | 0.27% | 1 | 9:41 |
| 74. | Phoenix Wright: Ace Attorney | 2,293 | 0.26% | 1 | 13:44 |
| 75. | Policenauts | 2,160 | 0.25% | 1 | 8:39 |
| 76. | Bravely Default | 2,098 | 0.24% | 1 | 8:16 |
| 77. | Castlevania: Aria of Sorrow | 2,086 | 0.24% | 1 | 6:00 |
| 78. | Lufia & the Fortress of Doom | 2,037 | 0.23% | 1 | 12:23 |
| 79. | Tales of Symphonia: Dawn of the New World | 2,013 | 0.23% | 1 | 15:35 |
| 80. | Castlevania: Symphony of the Night | 1,903 | 0.22% | 1 | 6:20 |
| 81. | Sweet Home | 1,887 | 0.22% | 1 | 14:37 |
| 82. | Pokémon FireRed and LeafGreen | 1,791 | 0.20% | 1 | 7:00 |
| 83. | The World Ends with You | 1,790 | 0.20% | 1 | 11:53 |
| 84. | Castlevania: The Dracula X Chronicles | 1,619 | 0.18% | 1 | 5:11 |
| 85. | Professor Layton and the Curious Village | 1,572 | 0.18% | 1 | 7:32 |
| 86. | Crystalis | 1,544 | 0.18% | 1 | 15:01 |
| 87. | Crusader of Centy | 1,497 | 0.17% | 1 | 9:31 |
| 88. | Legend of Legaia | 1,376 | 0.16% | 1 | 10:18 |
| 89. | Final Fantasy VI | 1,344 | 0.15% | 2 | 15:12 |
| 90. | Star Wars Jedi Knight: Jedi Academy | 1,307 | 0.15% | 1 | 7:34 |
| 91. | Metroid Fusion | 1,305 | 0.15% | 1 | 5:48 |
| 92. | Parasite Eve | 1,209 | 0.14% | 1 | 8:12 |
| 93. | The Legend of Heroes: Trails in the Sky Second Chapter | 1,180 | 0.13% | 1 | 13:58 |
| 94. | Mario & Luigi: Dream Team | 1,154 | 0.13% | 1 | 5:51 |
| 95. | Myst | 1,148 | 0.13% | 1 | 9:02 |
| 96. | Bastion | 1,103 | 0.13% | 1 | 7:18 |
| 97. | Demon's Crest | 1,057 | 0.12% | 1 | 6:58 |
| 98. | Super Mario RPG | 1,055 | 0.12% | 1 | 9:48 |
| 99. | Xenoblade Chronicles | 1,013 | 0.12% | 1 | 11:25 |
| 100. | Metroid: Zero Mission | 963 | 0.11% | 1 | 5:02 |
