| 1. | The Legend of Zelda: Ocarina of Time | 3,550,081 | 23.69% | 69 | 15:43:08 |
| 2. | Super Mario 64 | 1,202,909 | 8.03% | 23 | 8:28:46 |
| 3. | Prototype | 685,474 | 4.58% | 17 | 4:38:03 |
| 4. | Spider-Man: Edge of Time | 470,733 | 3.14% | 1 | 27:05 |
| 5. | Pokémon Emerald | 369,967 | 2.47% | 2 | 29:19 |
| 6. | Doshin the Giant | 277,737 | 1.85% | 5 | 59:44 |
| 7. | The Legend of Zelda: Breath of the Wild | 262,321 | 1.75% | 5 | 4:58:56 |
| 8. | Earthbound | 260,547 | 1.74% | 14 | 3:57:22 |
| 9. | Conker's Bad Fur Day | 248,136 | 1.66% | 4 | 59:37 |
| 10. | The Legend of Zelda: Majora's Mask | 175,980 | 1.17% | 7 | 4:25:53 |
| 11. | The Legend of Zelda | 173,249 | 1.16% | 5 | 45:41 |
| 12. | Superman | 165,545 | 1.10% | 1 | 13:20 |
| 13. | The Legend of Zelda: The Wind Waker | 161,840 | 1.08% | 5 | 1:40:21 |
| 14. | Need for Speed: Nitro | 142,656 | 0.95% | 1 | 5:55 |
| 15. | Metroid Prime 3: Corruption | 140,875 | 0.94% | 3 | 50:06 |
| 16. | Super Smash Bros. Melee | 139,940 | 0.93% | 5 | 1:02:24 |
| 17. | The Legend of Zelda: Link's Awakening | 131,977 | 0.88% | 1 | 4:23 |
| 18. | The Legend of Zelda: Twilight Princess | 124,750 | 0.83% | 3 | 1:14:49 |
| 19. | Shark Tale | 124,322 | 0.83% | 1 | 10:03 |
| 20. | Metroid Prime | 120,266 | 0.80% | 5 | 2:31:21 |
| 21. | Dead or Alive 5 | 119,034 | 0.79% | 2 | 16:12 |
| 22. | BlazBlue: Continuum Shift | 113,980 | 0.76% | 2 | 18:00 |
| 23. | F-Zero X | 112,354 | 0.75% | 3 | 16:50 |
| 24. | Mario Artist: Paint Studio | 108,740 | 0.73% | 3 | 38:02 |
| 25. | Grand Theft Auto V | 100,811 | 0.67% | 1 | 14:40 |
| 26. | Final Fantasy Crystal Chronicles: My Life as a Darklord | 100,130 | 0.67% | 1 | 14:08 |
| 27. | Hercules: The Legendary Journeys | 97,323 | 0.65% | 1 | 7:36 |
| 28. | Super Smash Bros. Ultimate | 80,206 | 0.54% | 2 | 56:34 |
| 29. | Star Fox 2 | 69,766 | 0.47% | 3 | 27:18 |
| 30. | Mario & Luigi: Superstar Saga | 67,382 | 0.45% | 2 | 10:24 |
| 31. | NBA Jam | 65,102 | 0.43% | 3 | 51:29 |
| 32. | Sonic Origins | 64,848 | 0.43% | 3 | 27:38 |
| 33. | Star Fox Adventures | 63,462 | 0.42% | 3 | 2:57:20 |
| 34. | Tony Hawk's Pro Skater | 61,547 | 0.41% | 2 | 24:01 |
| 35. | Mega Man Legends | 57,872 | 0.39% | 1 | 8:59 |
| 36. | Sonic Advance | 57,470 | 0.38% | 1 | 13:20 |
| 37. | 40 Winks | 50,110 | 0.33% | 2 | 34:25 |
| 38. | Auto Modellista | 49,311 | 0.33% | 2 | 40:33 |
| 39. | Chrono Trigger | 49,123 | 0.33% | 3 | 26:30 |
| 40. | Virtua Fighter | 49,096 | 0.33% | 2 | 16:48 |
| 41. | Epic Mickey | 47,834 | 0.32% | 1 | 23:38 |
| 42. | Tomb Raider | 47,296 | 0.32% | 2 | 8:00 |
| 43. | Rayman | 47,116 | 0.31% | 2 | 24:37 |
| 44. | Steel Battalion | 45,859 | 0.31% | 1 | 15:04 |
| 45. | Perfect Dark | 43,982 | 0.29% | 3 | 1:58:15 |
| 46. | Donkey Kong Country | 40,309 | 0.27% | 2 | 17:24 |
| 47. | Daikatana | 39,413 | 0.26% | 2 | 17:18 |
| 48. | Castlevania: Dracula X | 39,270 | 0.26% | 2 | 27:12 |
| 49. | X-Men | 38,489 | 0.26% | 2 | 17:55 |
| 50. | I-Ninja | 36,788 | 0.25% | 2 | 9:05 |
| 51. | F-Zero | 36,743 | 0.25% | 3 | 18:27 |
| 52. | Banjo-Kazooie | 36,717 | 0.25% | 1 | 17:03 |
| 53. | Viewpoint | 36,343 | 0.24% | 1 | 14:23 |
| 54. | Mario Kart 64 | 34,238 | 0.23% | 2 | 26:03 |
| 55. | Tempest 2000 | 33,137 | 0.22% | 2 | 56:27 |
| 56. | Harvest Moon | 31,919 | 0.21% | 1 | 7:00 |
| 57. | Super Mario Bros. | 31,839 | 0.21% | 3 | 58:10 |
| 58. | Super Mario World | 31,446 | 0.21% | 2 | 17:26 |
| 59. | SimCity 2000 | 31,058 | 0.21% | 1 | 6:14 |
| 60. | Cubivore: Survival of the Fittest | 30,912 | 0.21% | 1 | 11:11 |
| 61. | Sonic Adventure | 30,696 | 0.20% | 1 | 22:46 |
| 62. | WWF WrestleMania: The Arcade Game | 29,059 | 0.19% | 1 | 19:08 |
| 63. | Carnival | 28,882 | 0.19% | 1 | 19:04 |
| 64. | Zelda's Adventure | 27,755 | 0.19% | 2 | 42:38 |
| 65. | Narc | 27,238 | 0.18% | 2 | 15:40 |
| 66. | Final Fantasy Adventure | 27,155 | 0.18% | 2 | 14:32 |
| 67. | F-Zero X Expansion Kit | 26,731 | 0.18% | 2 | 59:54 |
| 68. | The Amazing Spider-Man: Web of Fire | 26,349 | 0.18% | 2 | 28:38 |
| 69. | Towers II: Plight of the Stargazer | 26,253 | 0.18% | 2 | 20:39 |
| 70. | Super Smash Bros. | 25,542 | 0.17% | 2 | 31:08 |
| 71. | Indiana Jones and the Infernal Machine | 25,050 | 0.17% | 1 | 11:05 |
| 72. | The Legend of Zelda: Skyward Sword HD | 24,443 | 0.16% | 1 | 8:02 |
| 73. | Super Mario's Wacky Worlds | 24,295 | 0.16% | 1 | 11:52 |
| 74. | All Night Nippon Super Mario Bros. | 23,699 | 0.16% | 1 | 7:14 |
| 75. | Rugrats: Scavenger Hunt | 23,663 | 0.16% | 1 | 8:04 |
| 76. | Swagman | 23,059 | 0.15% | 1 | 11:31 |
| 77. | Secret of Mana | 23,040 | 0.15% | 1 | 8:21 |
| 78. | Quad Desert Fury | 22,635 | 0.15% | 1 | 9:42 |
| 79. | NBA Jam T.E. | 21,094 | 0.14% | 2 | 21:04 |
| 80. | Quest 64 | 20,395 | 0.14% | 1 | 9:04 |
| 81. | The Legend of Zelda: Ocarina of Time 3D | 20,217 | 0.13% | 1 | 6:31 |
| 82. | Sonic the Hedgehog 2 | 19,944 | 0.13% | 3 | 33:35 |
| 83. | Bonk's Revenge | 19,878 | 0.13% | 1 | 15:19 |
| 84. | Pac-Man World 2 | 19,635 | 0.13% | 1 | 8:33 |
| 85. | Kingdom Hearts: Chain of Memories | 19,578 | 0.13% | 1 | 5:17 |
| 86. | Mortal Kombat Mythologies: Sub-Zero | 19,342 | 0.13% | 1 | 12:02 |
| 87. | Langrisser Millennium | 18,761 | 0.13% | 1 | 8:45 |
| 88. | Pokémon Red and Blue | 18,349 | 0.12% | 1 | 2:54 |
| 89. | Virtual Boy Wario Land | 18,256 | 0.12% | 2 | 2:10:33 |
| 90. | Knuckles' Chaotix | 18,077 | 0.12% | 1 | 10:39 |
| 91. | Heart of the Alien | 17,656 | 0.12% | 2 | 23:45 |
| 92. | Sonic CD | 17,206 | 0.11% | 1 | 14:58 |
| 93. | Mortal Kombat Trilogy | 16,714 | 0.11% | 1 | 19:33 |
| 94. | F-Zero AX | 16,631 | 0.11% | 1 | 7:08 |
| 95. | Japan Pro Golf Tour 64 | 16,548 | 0.11% | 1 | 8:54 |
| 96. | Paprium | 16,468 | 0.11% | 1 | 11:23 |
| 97. | Animal Crossing: Wild World | 16,357 | 0.11% | 1 | 10:41 |
| 98. | The Fairyland Story | 16,027 | 0.11% | 1 | 8:48 |
| 99. | Zombie Nation | 15,844 | 0.11% | 1 | 14:19 |
| 100. | Jet Force Gemini | 15,775 | 0.11% | 1 | 19:52 |
