| 1. | New Super Mario Bros. Wii | 5,375,316 | 6.47% | 6 | 5:34:56 |
| 2. | Super Mario Bros. 3 | 4,448,652 | 5.36% | 23 | 9:15:12 |
| 3. | Super Mario World | 3,819,137 | 4.60% | 54 | 1:11:23:20 |
| 4. | Pepsiman | 2,713,191 | 3.27% | 3 | 1:05:01 |
| 5. | Crash Bandicoot Purple: Ripto's Rampage and Spyro Orange: The Cortex Conspiracy | 2,318,944 | 2.79% | 1 | 42:28 |
| 6. | Mega Man X2 | 1,245,101 | 1.50% | 9 | 5:34:43 |
| 7. | Super Mario Bros. | 1,206,348 | 1.45% | 105 | 18:36:27 |
| 8. | Mega Man X3 | 1,023,724 | 1.23% | 8 | 6:18:10 |
| 9. | Super Metroid | 879,923 | 1.06% | 47 | 1:10:53:06 |
| 10. | Super Smash Bros. Brawl | 713,417 | 0.86% | 4 | 4:44:42 |
| 11. | Mega Man X | 698,422 | 0.84% | 16 | 8:59:56 |
| 12. | Super Mario 64 | 616,260 | 0.74% | 18 | 12:03:09 |
| 13. | The Legend of Zelda: A Link to the Past | 598,582 | 0.72% | 11 | 6:01:56 |
| 14. | Mario Bros. | 594,004 | 0.72% | 24 | 7:34:57 |
| 15. | Mario Kart 64 | 586,623 | 0.71% | 1 | 23:28 |
| 16. | Donkey Kong Country 2 | 565,129 | 0.68% | 11 | 10:42:00 |
| 17. | Mega Man 4 | 554,766 | 0.67% | 11 | 7:13:29 |
| 18. | Banjo-Kazooie | 535,002 | 0.64% | 2 | 4:53:11 |
| 19. | Super Mario Bros. 2 | 534,067 | 0.64% | 37 | 7:21:26 |
| 20. | The Legend of Zelda | 529,399 | 0.64% | 16 | 6:59:22 |
| 21. | Punch-Out!! | 517,847 | 0.62% | 16 | 2:29:21 |
| 22. | Super Punch-Out!! | 513,157 | 0.62% | 8 | 2:21:48 |
| 23. | Super Mario Kart | 505,904 | 0.61% | 2 | 48:12 |
| 24. | Sonic the Hedgehog 3 | 455,888 | 0.55% | 29 | 19:15:07 |
| 25. | Mega Man 2 | 432,801 | 0.52% | 22 | 10:31:46 |
| 26. | New Super Mario Bros. | 428,943 | 0.52% | 12 | 7:08:07 |
| 27. | Donkey Kong Country 3 | 422,102 | 0.51% | 5 | 5:36:47 |
| 28. | Resident Evil 4 | 411,226 | 0.50% | 3 | 2:05:29 |
| 29. | Luigi's Mansion | 408,310 | 0.49% | 6 | 2:50:46 |
| 30. | Resident Evil 4 | 401,144 | 0.48% | 3 | 34:05 |
| 31. | Castlevania: Aria of Sorrow | 383,740 | 0.46% | 19 | 3:34:21 |
| 32. | Donkey Kong Country | 369,292 | 0.44% | 17 | 9:22:06 |
| 33. | Metroid: Zero Mission | 361,375 | 0.44% | 10 | 7:47:07 |
| 34. | Castlevania: Portrait of Ruin | 355,015 | 0.43% | 10 | 3:27:51 |
| 35. | Super Smash Bros. | 352,801 | 0.42% | 4 | 34:28 |
| 36. | Super Smash Bros. Ultimate | 345,171 | 0.42% | 1 | 4:49:55 |
| 37. | Pink Panther: Pinkadelic Pursuit | 332,638 | 0.40% | 5 | 1:55:29 |
| 38. | Sonic the Hedgehog 2 | 329,464 | 0.40% | 19 | 7:29:07 |
| 39. | Super Mario RPG | 327,815 | 0.39% | 8 | 23:16:40 |
| 40. | Super Mario World 2: Yoshi's Island | 313,876 | 0.38% | 9 | 7:44:10 |
| 41. | Earthbound | 310,019 | 0.37% | 17 | 17:38:16 |
| 42. | Donkey Kong | 291,025 | 0.35% | 28 | 2:03:08 |
| 43. | Super Mario All-Stars | 287,261 | 0.35% | 8 | 3:51:44 |
| 44. | Mortal Kombat Mythologies: Sub-Zero | 284,900 | 0.34% | 3 | 1:17:22 |
| 45. | Zelda II: The Adventure of Link | 277,045 | 0.33% | 16 | 8:22:36 |
| 46. | Crash Bandicoot 2: Cortex Strikes Back | 259,858 | 0.31% | 4 | 2:13:30 |
| 47. | Metal Slug 3 | 256,410 | 0.31% | 2 | 59:26 |
| 48. | Yu-Gi-Oh! 5D's World Championship 2011: Over the Nexus | 253,181 | 0.30% | 1 | 3:25:02 |
| 49. | Super Mario Advance 4: Super Mario Bros. 3 | 248,675 | 0.30% | 3 | 2:08:02 |
| 50. | The King of Fighters '97 | 246,974 | 0.30% | 1 | 19:31 |
| 51. | The Legend of Zelda: Link's Awakening | 239,532 | 0.29% | 18 | 7:32:56 |
| 52. | Bomberman 64 | 236,017 | 0.28% | 3 | 2:34:00 |
| 53. | Marvel vs. Capcom: Clash of Super Heroes | 231,161 | 0.28% | 2 | 34:16 |
| 54. | Dragon Ball: Advanced Adventure | 228,770 | 0.28% | 3 | 1:57:17 |
| 55. | Rayman | 228,496 | 0.28% | 2 | 2:29:41 |
| 56. | Castlevania III: Dracula's Curse | 227,988 | 0.27% | 11 | 5:00:56 |
| 57. | Kingdom Hearts: Chain of Memories | 223,175 | 0.27% | 2 | 2:11:25 |
| 58. | Pokémon Red and Blue | 214,138 | 0.26% | 21 | 1:03:19:02 |
| 59. | Kirby & the Amazing Mirror | 213,837 | 0.26% | 3 | 1:55:34 |
| 60. | Castlevania: Symphony of the Night | 212,545 | 0.26% | 15 | 5:49:41 |
| 61. | Paper Mario | 207,141 | 0.25% | 2 | 4:19:57 |
| 62. | Mega Man 6 | 206,444 | 0.25% | 6 | 3:40:46 |
| 63. | The Legend of Zelda: Ocarina of Time | 202,485 | 0.24% | 13 | 22:26:39 |
| 64. | Super Smash Bros. Melee | 201,847 | 0.24% | 5 | 39:58 |
| 65. | Metroid Fusion | 201,549 | 0.24% | 6 | 7:50:31 |
| 66. | Mario Party | 199,190 | 0.24% | 2 | 1:01:59 |
| 67. | Oddworld: Abe's Exoddus | 196,828 | 0.24% | 6 | 7:19:35 |
| 68. | Pokémon Emerald | 193,753 | 0.23% | 5 | 6:23:57 |
| 69. | Sonic CD | 193,281 | 0.23% | 9 | 3:03:22 |
| 70. | Samurai Shodown IV: Amakusa's Revenge | 192,353 | 0.23% | 2 | 30:38 |
| 71. | Castlevania | 187,866 | 0.23% | 13 | 3:12:24 |
| 72. | Tekken 3 | 178,822 | 0.22% | 7 | 34:37 |
| 73. | Spyro: Year of the Dragon | 177,254 | 0.21% | 4 | 5:05:38 |
| 74. | Mega Man 3 | 175,331 | 0.21% | 10 | 5:03:56 |
| 75. | Spider-Man 2 | 175,000 | 0.21% | 5 | 3:03:38 |
| 76. | Syobon Action | 174,716 | 0.21% | 4 | 13:20 |
| 77. | Contra | 174,550 | 0.21% | 20 | 3:39:55 |
| 78. | Pokémon FireRed and LeafGreen | 173,958 | 0.21% | 4 | 7:35:16 |
| 79. | Arkanoid | 173,116 | 0.21% | 6 | 53:17 |
| 80. | Sonic Advance | 172,295 | 0.21% | 15 | 5:00:35 |
| 81. | Diddy Kong Racing | 172,231 | 0.21% | 1 | 2:09:22 |
| 82. | World of Goo | 171,657 | 0.21% | 1 | 35:44 |
| 83. | Mega Man 9 | 168,319 | 0.20% | 1 | 34:11 |
| 84. | Metal Gear Solid 2: Sons of Liberty | 167,885 | 0.20% | 1 | 2:10:49 |
| 85. | Sonic Advance 3 | 167,403 | 0.20% | 4 | 3:52:22 |
| 86. | Disney's Aladdin | 166,895 | 0.20% | 16 | 4:19:45 |
| 87. | Mega Man | 164,784 | 0.20% | 18 | 3:30:10 |
| 88. | Castlevania: Harmony of Dissonance | 164,781 | 0.20% | 14 | 2:25:19 |
| 89. | Pucca's Kisses | 162,545 | 0.20% | 1 | 48:50 |
| 90. | Paper Mario: The Thousand-Year Door | 153,802 | 0.19% | 7 | 22:42:41 |
| 91. | Lunar Pool | 153,406 | 0.18% | 2 | 1:02:25 |
| 92. | Neo Turf Masters | 152,534 | 0.18% | 3 | 1:05:19 |
| 93. | Battletoads | 151,610 | 0.18% | 18 | 4:49:03 |
| 94. | Killer Instinct | 149,888 | 0.18% | 1 | 10:53 |
| 95. | Crash Bandicoot: Warped | 144,721 | 0.17% | 5 | 3:23:57 |
| 96. | Super Mario Bros. Deluxe | 142,170 | 0.17% | 8 | 43:58 |
| 97. | Excitebike | 141,764 | 0.17% | 5 | 15:29 |
| 98. | Pokémon Gold and Silver | 140,599 | 0.17% | 7 | 12:53:50 |
| 99. | Mega Man 7 | 137,946 | 0.17% | 5 | 2:52:22 |
| 100. | Dr. Robotnik's Mean Bean Machine | 136,714 | 0.16% | 1 | 12:04 |
